Mechanism and specificity of the human paracaspase MALT1

J Hachmann, SJ Snipas, BJ van Raam… - Biochemical …, 2012 - portlandpress.com
J Hachmann, SJ Snipas, BJ van Raam, EM Cancino, EJ Houlihan, M Poreba
Biochemical Journal, 2012portlandpress.com
The paracaspase domain of MALT1 (mucosa-associated lymphoid tissue lymphoma
translocation protein 1) is a component of a gene translocation fused to the N-terminal
domains of the cellular inhibitor of apoptosis protein 2. The paracaspase itself, commonly
known as MALT1, participates in the NF-κB (nuclear factor κB) pathway, probably by driving
survival signals downstream of the B-cell antigen receptor through MALT1 proteolytic
activity. We have developed methods for the expression and purification of recombinant full …
The paracaspase domain of MALT1 (mucosa-associated lymphoid tissue lymphoma translocation protein 1) is a component of a gene translocation fused to the N-terminal domains of the cellular inhibitor of apoptosis protein 2. The paracaspase itself, commonly known as MALT1, participates in the NF-κB (nuclear factor κB) pathway, probably by driving survival signals downstream of the B-cell antigen receptor through MALT1 proteolytic activity. We have developed methods for the expression and purification of recombinant full-length MALT1 and its constituent catalytic domain alone. Both are activated by dimerization without cleavage, with a similar dimerization barrier to the distantly related cousins, the apical caspases. By using positional-scanning peptidyl substrate libraries we demonstrate that the activity and specificity of full-length MALT1 is recapitulated by the catalytic domain alone, showing a stringent requirement for cleaving after arginine, and with striking peptide length constraints for efficient hydrolysis. Rates of cleavage (kcat/Km values) of optimal peptidyl substrates are in the same order (103–104 M−1·s−1) as for a putative target protein CYLD. Thus MALT1 has many similarities to caspase 8, even cleaving the putative target protein CYLD with comparable efficiencies, but with diametrically opposite primary substrate specificity.
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